tailieunhanh - DNA barcoding on cardinalfishes (Apogonidae) of Thoothukudi coast

Cardinalfishes belongs to the family, Apogonidae is cryptic in nature that often shows taxonomic ambiguity through conventional taxonomy. It is globally accepted that mitochondrial DNA marker ., Cytochrome C Oxidase (COI) can be used to resolve these taxonomic uncertainties. In the present study, the DNA barcode was developed using COI marker for the two species of cardinalfishes (Archamia bleekeri and Ostorhinchus fleurieu) collected from Thoothukudi coast. Results showed that the distance values between the two species are higher than that of within the species. The Cytochrome C Oxidase subunit I (COI) gene showed more number of transitional pairs (Si) than transversional pairs (Sv) with a ratio of . The average distance values between A. bleekeri and O. fleurieu were , , , , , and distance values among the A. bleekeri and O. fleurieu were and , and respectively using K2P parameter. The average nucleotide frequency calculated were A= , T(U)= , C= and G= . The estimated GC content of A. bleekeri and O. fleurieu was () and () respectively and the average GC content was found to be . Phylogenic trees were constructed individually for the two species using MEGA software and the Neighbour-Joining tree showed distinct clusters shared by the species of same genera. In conclusion, the present study developed DNA barcode database for the two species of cardinal fishes that can be used for taxonomic purposes for these species. | DNA barcoding on cardinalfishes (Apogonidae) of Thoothukudi coast

• Ngư nghiệp
• DNA barcoding
• Gulf of mannar
• DNA barcoding on cardinalfishes
• DNA barcoding
• Thoothukudi coast
• Potential DNA barcoding loci
• Plastid genome
• Intraspecies discrimination in rice
• DNA barcoding in rice
• DNA barcoding for identification
• Identification of some fish species (Carangidae)
• Vietnam coastal area
• Morphological classification method
• Turkish Journal of Botany
• Tạp chí Thực vật học
• Indian wild coffee species
• Unique fixed nucleotides
• DNA sequence polymorphism
• BMC Plant Biology
• Low copy nuclear gene
• Plant collections
• Ecological diversity
• BMC Genomics
• DNA barcode
• High throughput sequencing
• COI barcode region
• Fungi symbionts
• Tạp chí khoa học
• Công nghệ sinh học
• Khoa học tự nhiên
• Dendrobium transparens
• Pitcher plant
• Cytochrome oxidase I
• Nepenthes genus
• Molecular identification
• Bayesian inference
• Maximum likelihood
• Medicinal plants
• Journal of Zoology
• Cytochrome oxidase I COI
• Black cherry aphid
• Nucleotide diversity
• Plant Biology
• Super barcoding
• Calypogeia species
• DNA fragments
• Multi locus barcoding
• Adinandra lienii
• Mã vạch DNA matK
• Trình tự đoạn gen matK phân lập
• Chi Adinandra thuộc họ Chè Theaceae
• Hỗn hợp phản ứng PCR
• Lepidopteran insects and mtDNA
• Cole crops in MID HILLS
• MID HILLS of Meghalaya
• DNA barcodes
• Major insect pest
• BMC Genetics
• BOLD systems
• Fungal taxonomy
• DNA barcoding technique
• Trình tự gen RpoC1
• Gen RpoC1
• Gen lục lạp
• Xác định quan hệ chủng loài
• Kỹ thuật DNA mã vạch
• Genome Biology
• Assembly free
• Alignment free
• Genome skimming
• DNA reference database
• Second generation sequencing
• P corylifoilia
• M pruriens
• C ternatea
• TrnH psbA
• Species Identification
• Trình tự gen rpoB
• Morinda officinalism
• Ngân hàng gen mã số KR689730
• PCR genotyping
• Identification of lichens
• Advancements in methods
• Various natural compounds
• BMC Bioinformatics
• Cellular barcoding
• Lineage tracing
• Next generation sequencing
• Sequencing error
• PCR error
• COI gene
• Intra and inter species diversity
• Tropical forest
• Genetic distance of leaf beetles
• Journal of Botany
• Hypericum occurring in Sicily
• Hypericum triquetrifolium
• Phytotherapic purposes
• Molecular analyses
• Tyrrhenian Sea
• Cryptic diversity
• Rare species
• Cytochrome c oxidase subunit I (COI)
• Luận văn Thạc sĩ
• Luận văn Thạc sĩ Sinh học
• Rong biển thuộc chi Ulva
• Sinh học thực nghiệm
• Sinh học phân tử DNA barcoding
• Phương pháp điện di Gel agarose
• Approximate Bayesian computation
• Freshwater species
• Neocaridina species